Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN05444358_104190 | Not Available | Positive | 2651855 - 2652727 | 32270.1 |
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN05444358_104191 | Not Available | Positive | 2652720 - 2653619 | 33045.2 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05444358_104192 | Not Available | Positive | 2653624 - 2654721 | 39416.8 |
| phospholipid transport system substrate-binding protein | SAMN05444358_104193 | Not Available | Negative | 2654802 - 2655410 | 22411.2 |
| phospholipid-binding lipoprotein mlaa | SAMN05444358_104194 | Not Available | Negative | 2655400 - 2656215 | 30037.3 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05444358_104195 | Not Available | Positive | 2656513 - 2656968 | 15396.5 |
| glycerophosphoryl diester phosphodiesterase | SAMN05444358_104196 | Not Available | Positive | 2656965 - 2657735 | 28034.4 |
| hypothetical protein | SAMN05444358_104197 | Not Available | Positive | 2657781 - 2658968 | 44199.8 |
| 4a-hydroxytetrahydrobiopterin dehydratase | SAMN05444358_104198 | Not Available | Positive | 2658965 - 2659270 | 11468.7 |
| ef hand | SAMN05444358_104199 | Not Available | Negative | 2659314 - 2659661 | 12751.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
