Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444358_104180 | Not Available | Negative | 2643282 - 2643875 | 21311.4 |
| hypothetical protein | SAMN05444358_104181 | Not Available | Negative | 2643872 - 2644342 | 16793.9 |
| flagellar flil protein | SAMN05444358_104182 | Not Available | Negative | 2644352 - 2644849 | 17831.8 |
| flagellar m-ring protein flif | SAMN05444358_104183 | Not Available | Positive | 2644969 - 2646558 | 56069.4 |
| flagellar assembly protein flih | SAMN05444358_104184 | Not Available | Positive | 2646555 - 2647154 | 21654.8 |
| flagellar motor switch protein flin/fliy | SAMN05444358_104185 | Not Available | Positive | 2647147 - 2647434 | 10394.5 |
| flagellar biosynthetic protein flip | SAMN05444358_104186 | Not Available | Positive | 2647434 - 2648159 | 26138.2 |
| signal transduction histidine kinase | SAMN05444358_104187 | Not Available | Negative | 2648161 - 2649603 | 51853.1 |
| two-component system, ompr family, response regulator | SAMN05444358_104188 | Not Available | Negative | 2649600 - 2650337 | 27352.7 |
| glucose/mannose transport system substrate-binding protein | SAMN05444358_104189 | Not Available | Positive | 2650553 - 2651797 | 43726.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
