Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444358_104170 | Not Available | Positive | 2631513 - 2632043 | 19396.3 |
| nicotinamidase/pyrazinamidase | SAMN05444358_104171 | Not Available | Negative | 2632047 - 2632640 | 20934.7 |
| upf0176 protein | SAMN05444358_104172 | Not Available | Positive | 2632737 - 2633642 | 33862.1 |
| ion channel | SAMN05444358_104173 | Not Available | Positive | 2633707 - 2634207 | 17961.8 |
| hypothetical protein | SAMN05444358_104174 | Not Available | Negative | 2634214 - 2634543 | 12528.8 |
| betaine aldehyde dehydrogenase | SAMN05444358_104175 | Not Available | Positive | 2634736 - 2636190 | 51395.1 |
| dimethylglycine dehydrogenase | SAMN05444358_104176 | Not Available | Positive | 2636311 - 2638755 | 90213.8 |
| 2-methylcitrate dehydratase prpd | SAMN05444358_104177 | Not Available | Positive | 2638752 - 2640104 | 47765.8 |
| hypothetical protein | SAMN05444358_104178 | Not Available | Negative | 2640222 - 2642369 | 77955.8 |
| chemotaxis protein mota | SAMN05444358_104179 | Not Available | Negative | 2642366 - 2643235 | 31483.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
