Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol kinase | SAMN05444358_104160 | Not Available | Negative | 2619240 - 2620718 | 53585.4 |
| pantothenate synthetase | SAMN05444358_104161 | Not Available | Negative | 2620789 - 2621640 | 31267.6 |
| ketopantoate hydroxymethyltransferase | SAMN05444358_104162 | Not Available | Negative | 2621637 - 2622476 | 29465.6 |
| peptide/nickel transport system substrate-binding protein | SAMN05444358_104163 | Not Available | Positive | 2622648 - 2624135 | 53909.2 |
| hypothetical protein | SAMN05444358_104164 | Not Available | Positive | 2624155 - 2625171 | 36981.2 |
| peptide/nickel transport system permease protein | SAMN05444358_104165 | Not Available | Positive | 2625212 - 2626159 | 34243.8 |
| peptide/nickel transport system permease protein | SAMN05444358_104166 | Not Available | Positive | 2626156 - 2626971 | 28658.8 |
| peptide/nickel transport system atp-binding protein | SAMN05444358_104167 | Not Available | Positive | 2626968 - 2628566 | 58582.4 |
| aldehyde dehydrogenase (nad+) | SAMN05444358_104168 | Not Available | Positive | 2628607 - 2630058 | 50782.8 |
| nicotinate phosphoribosyltransferase | SAMN05444358_104169 | Not Available | Negative | 2630055 - 2631347 | 49217.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
