Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, umf1 family | SAMN05444358_104150 | Not Available | Positive | 2611100 - 2612467 | 49280.7 |
| murein endopeptidase. metallo peptidase. merops family m74 | SAMN05444358_104151 | Not Available | Positive | 2612464 - 2613327 | 31966.3 |
| hypothetical protein | SAMN05444358_104152 | Not Available | Positive | 2613300 - 2614184 | 32371.5 |
| hypothetical protein | SAMN05444358_104153 | Not Available | Positive | 2614276 - 2614920 | 22728.3 |
| ribosome-associated protein | SAMN05444358_104154 | Not Available | Positive | 2615183 - 2615602 | 15655.0 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05444358_104155 | Not Available | Positive | 2615565 - 2616410 | 29320.5 |
| d-aminopeptidase | SAMN05444358_104156 | Not Available | Positive | 2616493 - 2617506 | 33651.0 |
| cytochrome c | SAMN05444358_104157 | Not Available | Positive | 2617621 - 2618034 | 14491.3 |
| isopentenyl-diphosphate delta-isomerase | SAMN05444358_104158 | Not Available | Positive | 2618180 - 2618722 | 20591.6 |
| ssra-binding protein | SAMN05444358_104159 | Not Available | Positive | 2618767 - 2619243 | 18345.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
