Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase | SAMN05444358_104130 | Not Available | Positive | 2587829 - 2588941 | 39295.3 |
| s-adenosylmethionine uptake transporter | SAMN05444358_104131 | Not Available | Negative | 2588998 - 2589936 | 33385.6 |
| protein of unknown function | SAMN05444358_104132 | Not Available | Positive | 2590129 - 2590596 | 17065.3 |
| abc-2 type transport system atp-binding protein | SAMN05444358_104133 | Not Available | Negative | 2590593 - 2591618 | 37219.7 |
| uncharacterized conserved protein, contains zn-finger domain | SAMN05444358_104134 | Not Available | Positive | 2591673 - 2591861 | 6808.0 |
| phop regulatory network protein yrbl | SAMN05444358_104135 | Not Available | Positive | 2591906 - 2592568 | 24282.3 |
| dna polymerase i | SAMN05444358_104136 | Not Available | Positive | 2592680 - 2595481 | 102732.0 |
| protein of unknown function | SAMN05444358_104137 | Not Available | Negative | 2595527 - 2595757 | 8127.38 |
| hydroxypyruvate isomerase | SAMN05444358_104138 | Not Available | Negative | 2595832 - 2596587 | 27905.0 |
| eama-like transporter family protein | SAMN05444358_104139 | Not Available | Positive | 2596760 - 2597740 | 34050.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
