Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| myo-inositol 2-dehydrogenase | SAMN05444358_104110 | Not Available | Negative | 2568459 - 2569448 | 35319.1 |
| fructose-bisphosphate aldolase, class ii | SAMN05444358_104111 | Not Available | Negative | 2569450 - 2570280 | 29190.6 |
| 5-deoxyglucuronate isomerase | SAMN05444358_104112 | Not Available | Negative | 2570277 - 2571134 | 32046.0 |
| 5-dehydro-2-deoxygluconokinase | SAMN05444358_104113 | Not Available | Negative | 2571147 - 2572124 | 34081.3 |
| phytanoyl-coa dioxygenase (phyh) | SAMN05444358_104114 | Not Available | Negative | 2572121 - 2572960 | 30817.7 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase | SAMN05444358_104115 | Not Available | Negative | 2572960 - 2574828 | 67682.8 |
| predicted dehydrogenase | SAMN05444358_104116 | Not Available | Positive | 2574958 - 2576061 | 40107.5 |
| 2-keto-myo-inositol dehydratase | SAMN05444358_104117 | Not Available | Positive | 2576081 - 2576974 | 32981.6 |
| predicted dehydrogenase | SAMN05444358_104118 | Not Available | Positive | 2576987 - 2578120 | 40792.3 |
| transcriptional regulator, laci family | SAMN05444358_104119 | Not Available | Negative | 2578123 - 2579121 | 36244.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
