Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c-type protein napc | SAMN05444358_104100 | Not Available | Negative | 2556639 - 2558429 | 64921.2 |
| dissimilatory nitrite reductase (no-forming), cytochrome cd1 type apoprotein | SAMN05444358_104101 | Not Available | Negative | 2558553 - 2560229 | 61742.6 |
| uncharacterized protein involved in response to no | SAMN05444358_104102 | Not Available | Positive | 2560475 - 2561668 | 41958.1 |
| hint domain-containing protein | SAMN05444358_104103 | Not Available | Negative | 2561671 - 2562777 | 38978.0 |
| nitric oxide reductase, norc subunit apoprotein | SAMN05444358_104104 | Not Available | Positive | 2563026 - 2563475 | 16950.1 |
| nitric oxide reductase, norb subunit apoprotein | SAMN05444358_104105 | Not Available | Positive | 2563492 - 2564859 | 51524.0 |
| nitric oxide reductase norq protein | SAMN05444358_104106 | Not Available | Positive | 2564865 - 2565674 | 29080.1 |
| nitric oxide reductase nord protein | SAMN05444358_104107 | Not Available | Positive | 2565684 - 2567606 | 71322.0 |
| nitric oxide reductase nore protein | SAMN05444358_104108 | Not Available | Positive | 2567603 - 2568151 | 19941.6 |
| cytochrome c oxidase subunit iv | SAMN05444358_104109 | Not Available | Positive | 2568208 - 2568444 | 8357.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
