Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444358_10490 | Not Available | Negative | 2548794 - 2549057 | 9193.41 |
| cytochrome c oxidase, cbb3-type, subunit iii | SAMN05444358_10491 | Not Available | Negative | 2549014 - 2550567 | 57238.8 |
| heme d1 biosynthesis radical sam protein nirj | SAMN05444358_10492 | Not Available | Negative | 2550542 - 2551756 | 45034.5 |
| transcriptional regulator, asnc family | SAMN05444358_10493 | Not Available | Negative | 2551760 - 2552242 | 17633.6 |
| transcriptional regulator, asnc family | SAMN05444358_10494 | Not Available | Negative | 2552239 - 2552688 | 16705.1 |
| transcriptional regulator, asnc family | SAMN05444358_10495 | Not Available | Negative | 2552685 - 2553674 | 36216.6 |
| protein nirf | SAMN05444358_10496 | Not Available | Negative | 2553679 - 2554824 | 41696.7 |
| cytochrome c55x | SAMN05444358_10497 | Not Available | Negative | 2554821 - 2555204 | 13516.1 |
| uroporphyrin-iii c-methyltransferase | SAMN05444358_10498 | Not Available | Negative | 2555197 - 2555958 | 26858.5 |
| plastocyanin | SAMN05444358_10499 | Not Available | Negative | 2556172 - 2556585 | 15144.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
