Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plastocyanin | SAMN05444358_10480 | Not Available | Negative | 2538328 - 2538852 | 19034.5 |
| hypothetical protein | SAMN05444358_10481 | Not Available | Negative | 2538849 - 2539427 | 20446.3 |
| thiamine biosynthesis lipoprotein | SAMN05444358_10482 | Not Available | Negative | 2539766 - 2540665 | 31516.9 |
| copper chaperone nosl | SAMN05444358_10483 | Not Available | Negative | 2540662 - 2541177 | 18139.8 |
| cu-processing system permease protein | SAMN05444358_10484 | Not Available | Negative | 2541174 - 2541995 | 28299.5 |
| cu-processing system atp-binding protein | SAMN05444358_10485 | Not Available | Negative | 2541992 - 2542885 | 31592.3 |
| nitrous oxidase accessory protein | SAMN05444358_10486 | Not Available | Negative | 2542875 - 2544131 | 45335.5 |
| nitrous oxide reductase apoprotein | SAMN05444358_10487 | Not Available | Negative | 2544135 - 2546042 | 70184.7 |
| nosr/niri family transcriptional regulator, nitrous oxide reductase regulator | SAMN05444358_10488 | Not Available | Negative | 2546057 - 2548234 | 79755.9 |
| hypothetical protein | SAMN05444358_10489 | Not Available | Negative | 2548225 - 2548689 | 16395.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
