Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444358_10470 | Not Available | Positive | 2526676 - 2526792 | 4471.66 |
| transcriptional regulator, iclr family | SAMN05444358_10471 | Not Available | Negative | 2527261 - 2528040 | 28259.1 |
| trap transporter, dctm subunit | SAMN05444358_10472 | Not Available | Negative | 2528052 - 2529410 | 47942.3 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05444358_10473 | Not Available | Negative | 2529410 - 2530075 | 24745.6 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05444358_10474 | Not Available | Negative | 2530142 - 2531380 | 45575.9 |
| choline dehydrogenase | SAMN05444358_10475 | Not Available | Positive | 2531490 - 2533085 | 58121.1 |
| transcriptional regulator, arac family | SAMN05444358_10476 | Not Available | Negative | 2533485 - 2534579 | 40031.9 |
| predicted dienelactone hydrolase | SAMN05444358_10477 | Not Available | Positive | 2534707 - 2535738 | 37503.2 |
| ankyrin repeat | SAMN05444358_10478 | Not Available | Negative | 2535818 - 2537359 | 56443.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444358_10479 | Not Available | Negative | 2537624 - 2538325 | 26261.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
