Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative tricarboxylic transport membrane protein | SAMN05444358_10460 | Not Available | Negative | 2517600 - 2519114 | 52456.2 |
| tripartite tricarboxylate transporter tctb family protein | SAMN05444358_10461 | Not Available | Negative | 2519120 - 2519587 | 16513.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444358_10462 | Not Available | Negative | 2519655 - 2520614 | 32820.2 |
| dna-binding transcriptional regulator, lysr family | SAMN05444358_10463 | Not Available | Positive | 2520724 - 2521653 | 33512.6 |
| hypothetical protein | SAMN05444358_10464 | Not Available | Positive | 2522254 - 2522553 | 10848.7 |
| vplpa-cterm protein sorting domain-containing protein | SAMN05444358_10465 | Not Available | Negative | 2522467 - 2523348 | 31503.4 |
| hypothetical protein | SAMN05444358_10466 | Not Available | Negative | 2523765 - 2524055 | 11006.5 |
| hypothetical protein | SAMN05444358_10467 | Not Available | Negative | 2524151 - 2524504 | 12952.5 |
| hypothetical protein | SAMN05444358_10468 | Not Available | Positive | 2524921 - 2525730 | 30308.4 |
| hypothetical protein | SAMN05444358_10469 | Not Available | Positive | 2526059 - 2526601 | 19689.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
