Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | SAMN05444358_10450 | Not Available | Negative | 2508007 - 2508453 | 15768.8 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | SAMN05444358_10451 | Not Available | Positive | 2508943 - 2509527 | 20601.2 |
| ubiquinol-cytochrome c reductase cytochrome b subunit | SAMN05444358_10452 | Not Available | Positive | 2509542 - 2510873 | 50191.6 |
| ubiquinol-cytochrome c reductase cytochrome c1 subunit | SAMN05444358_10453 | Not Available | Positive | 2510889 - 2511677 | 28615.9 |
| threonylcarbamoyladenosine trna methylthiotransferase mtab | SAMN05444358_10454 | Not Available | Negative | 2511824 - 2513080 | 46720.1 |
| diaminopimelate epimerase | SAMN05444358_10455 | Not Available | Negative | 2513077 - 2513910 | 29864.5 |
| Trna-lys | Not Available | Not Available | Positive | 2514130 - 2514205 | Not Available |
| hypothetical protein | SAMN05444358_10457 | Not Available | Negative | 2514638 - 2515348 | 27018.0 |
| hypothetical protein | SAMN05444358_10458 | Not Available | Negative | 2515402 - 2516130 | 27274.9 |
| 3-carboxy-cis,cis-muconate cycloisomerase | SAMN05444358_10459 | Not Available | Negative | 2516531 - 2517607 | 39264.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
