Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, marr family | SAMN05444358_10439 | Not Available | Negative | 2499508 - 2500020 | 19080.1 |
| branched chain amino acid aminotransferase apoenzyme | SAMN05444358_10440 | Not Available | Positive | 2500180 - 2501046 | 31853.8 |
| transcriptional regulator, arac family | SAMN05444358_10441 | Not Available | Positive | 2501163 - 2502113 | 34616.4 |
| hypothetical protein | SAMN05444358_10442 | Not Available | Positive | 2502224 - 2502589 | 13146.6 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | SAMN05444358_10443 | Not Available | Negative | 2503065 - 2503664 | 22329.5 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05444358_10444 | Not Available | Negative | 2503723 - 2504658 | 33371.1 |
| uncharacterized protein | SAMN05444358_10445 | Not Available | Negative | 2504712 - 2505320 | 22407.7 |
| chorismate synthase | SAMN05444358_10446 | Not Available | Negative | 2505358 - 2506458 | 39446.8 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMN05444358_10447 | Not Available | Negative | 2506551 - 2506991 | 15978.9 |
| negative transcriptional regulator, paib family | SAMN05444358_10449 | Not Available | Positive | 2507374 - 2507994 | 22864.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
