Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin-type protein naph | SAMN05444358_10429 | Not Available | Negative | 2489490 - 2490407 | 33201.0 |
| periplasmic nitrate reductase subunit napg | SAMN05444358_10430 | Not Available | Negative | 2490404 - 2491222 | 28952.7 |
| periplasmic nitrate reductase subunit napa apoprotein | SAMN05444358_10431 | Not Available | Negative | 2491250 - 2493742 | 93051.8 |
| periplasmic nitrate reductase chaperone napd | SAMN05444358_10432 | Not Available | Negative | 2493760 - 2494032 | 9719.43 |
| ferredoxin-type protein napf | SAMN05444358_10433 | Not Available | Negative | 2494029 - 2494541 | 18175.4 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN05444358_10434 | Not Available | Negative | 2494755 - 2496686 | 68169.0 |
| farnesyl-diphosphate synthase | SAMN05444358_10435 | Not Available | Negative | 2496708 - 2497574 | 30552.4 |
| exodeoxyribonuclease vii small subunit | SAMN05444358_10436 | Not Available | Negative | 2497575 - 2497817 | 8794.41 |
| acetoin utilization deacetylase acuc | SAMN05444358_10437 | Not Available | Negative | 2497814 - 2498740 | 33200.2 |
| two-component system, ompr family, phosphate regulon response regulator ompr | SAMN05444358_10438 | Not Available | Negative | 2498810 - 2499511 | 26230.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
