Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444358_10419 | Not Available | Negative | 2480490 - 2481401 | 33384.2 |
| hypothetical protein | SAMN05444358_10420 | Not Available | Negative | 2481538 - 2482848 | 48784.9 |
| hypothetical protein | SAMN05444358_10421 | Not Available | Negative | 2482861 - 2484207 | 49898.2 |
| ribosomal protein s12 methylthiotransferase accessory factor | SAMN05444358_10422 | Not Available | Negative | 2484204 - 2485397 | 43011.8 |
| Trna-thr | Not Available | Not Available | Positive | 2485558 - 2485633 | Not Available |
| 5-aminolevulinate synthase | SAMN05444358_10424 | Not Available | Negative | 2485915 - 2487138 | 44318.0 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444358_10425 | Not Available | Positive | 2487201 - 2488025 | 30252.5 |
| hypothetical protein | SAMN05444358_10426 | Not Available | Negative | 2488054 - 2488311 | 8597.13 |
| cytochrome c-type protein napc | SAMN05444358_10427 | Not Available | Negative | 2488324 - 2489016 | 26236.8 |
| periplasmic nitrate reductase subunit napb | SAMN05444358_10428 | Not Available | Negative | 2489043 - 2489477 | 16004.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
