Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted amidohydrolase | SAMN05444358_1049 | Not Available | Positive | 2467522 - 2468490 | 35700.4 |
| arginine decarboxylase | SAMN05444358_10410 | Not Available | Positive | 2468533 - 2471265 | 103200.0 |
| hypothetical protein | SAMN05444358_10411 | Not Available | Positive | 2471288 - 2472736 | 54977.8 |
| predicted choloylglycine hydrolase | SAMN05444358_10412 | Not Available | Positive | 2472745 - 2473734 | 37350.4 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | SAMN05444358_10413 | Not Available | Positive | 2473915 - 2475399 | 54728.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444358_10414 | Not Available | Positive | 2475525 - 2476286 | 27433.7 |
| uncharacterized n-terminal domain of lipid-a-disaccharide synthase | SAMN05444358_10415 | Not Available | Positive | 2476283 - 2476582 | 11383.2 |
| protein n-acetyltransferase, rimj/riml family | SAMN05444358_10416 | Not Available | Positive | 2476757 - 2477392 | 24004.6 |
| tolb amino-terminal domain-containing protein | SAMN05444358_10417 | Not Available | Positive | 2477471 - 2479240 | 66781.8 |
| eama domain-containing membrane protein rard | SAMN05444358_10418 | Not Available | Positive | 2479443 - 2480369 | 32692.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
