Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444358_103333 | Not Available | Positive | 2460389 - 2460868 | 17906.1 |
| helix-turn-helix | SAMN05444358_103334 | Not Available | Positive | 2460941 - 2461266 | 12141.5 |
| universal stress protein family protein | SAMN05444358_1041 | Not Available | Positive | 2461267 - 2461473 | 7240.72 |
| mfs transporter, dha1 family, tetracycline resistance protein | SAMN05444358_1042 | Not Available | Positive | 2461696 - 2462901 | 42539.1 |
| succinate semialdehyde dehydrogenase | SAMN05444358_1043 | Not Available | Negative | 2462961 - 2464436 | 52248.4 |
| 4-aminobutyrate aminotransferase | SAMN05444358_1044 | Not Available | Negative | 2464439 - 2465716 | 45215.4 |
| transcriptional regulator, xre family with cupin sensor | SAMN05444358_1045 | Not Available | Positive | 2465867 - 2466433 | 20647.8 |
| phnb protein | SAMN05444358_1046 | Not Available | Positive | 2466571 - 2467044 | 16627.5 |
| hypothetical protein | SAMN05444358_1047 | Not Available | Positive | 2467041 - 2467391 | 13306.5 |
| hypothetical protein | SAMN05444358_1048 | Not Available | Positive | 2467388 - 2467525 | 5090.22 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
