Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylate cyclase | SAMN05444358_103323 | Not Available | Positive | 2453789 - 2454952 | 42149.9 |
| hypothetical protein | SAMN05444358_103324 | Not Available | Negative | 2455114 - 2455488 | 13330.9 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN05444358_103325 | Not Available | Negative | 2455733 - 2456539 | 28779.2 |
| hypothetical protein | SAMN05444358_103326 | Not Available | Negative | 2456545 - 2456838 | 10955.0 |
| prephenate dehydrogenase | SAMN05444358_103327 | Not Available | Positive | 2457053 - 2457826 | 28002.9 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN05444358_103328 | Not Available | Negative | 2457831 - 2458463 | 23317.1 |
| transcriptional regulator, xre family | SAMN05444358_103329 | Not Available | Negative | 2458502 - 2458720 | 8250.06 |
| hypothetical protein | SAMN05444358_103330 | Not Available | Negative | 2458724 - 2459173 | 16378.2 |
| hypothetical protein | SAMN05444358_103331 | Not Available | Positive | 2459744 - 2459893 | 5369.29 |
| hypothetical protein | SAMN05444358_103332 | Not Available | Positive | 2459890 - 2460387 | 18592.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
