Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444358_103303 | Not Available | Positive | 2436393 - 2437094 | 25577.8 |
| saccharopine dehydrogenase nadp binding domain-containing protein | SAMN05444358_103304 | Not Available | Positive | 2437091 - 2438263 | 42356.3 |
| chap domain-containing protein | SAMN05444358_103305 | Not Available | Negative | 2438683 - 2439042 | 13319.9 |
| hypothetical protein | SAMN05444358_103306 | Not Available | Negative | 2439363 - 2439644 | 10904.1 |
| transcriptional regulator, marr family | SAMN05444358_103307 | Not Available | Negative | 2440092 - 2440571 | 17737.4 |
| virginiamycin a acetyltransferase | SAMN05444358_103308 | Not Available | Positive | 2440674 - 2441354 | 25261.3 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05444358_103309 | Not Available | Positive | 2441581 - 2442102 | 18050.9 |
| peptidase family s41 | SAMN05444358_103310 | Not Available | Negative | 2442491 - 2443816 | 48517.6 |
| hypothetical protein | SAMN05444358_103311 | Not Available | Negative | 2443897 - 2444127 | 8800.26 |
| protein of unknown function | SAMN05444358_103312 | Not Available | Negative | 2444227 - 2444547 | 11987.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
