Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine cyclodeaminase | SAMN05444358_103293 | Not Available | Negative | 2427761 - 2428714 | 33791.7 |
| transcriptional regulator, lysr family | SAMN05444358_103294 | Not Available | Positive | 2428892 - 2429824 | 34199.1 |
| l-arginine abc transporter membrane protein /l-ornithine abc transporter membrane protein | SAMN05444358_103295 | Not Available | Negative | 2429847 - 2430584 | 27531.1 |
| histidine transport system permease protein/arginine/ornithine transport system permease protein | SAMN05444358_103296 | Not Available | Negative | 2430588 - 2431280 | 25291.8 |
| polar amino acid transport system substrate-binding protein/lysine/arginine/ornithine transport system substrate-binding protein/histidine transport system substrate-binding protein | SAMN05444358_103297 | Not Available | Negative | 2431353 - 2432126 | 28088.0 |
| amino acid abc transporter atp-binding protein, paat family | SAMN05444358_103298 | Not Available | Negative | 2432169 - 2432963 | 29342.2 |
| l-cysteine/cystine lyase | SAMN05444358_103299 | Not Available | Positive | 2433182 - 2434336 | 41875.1 |
| hypothetical protein | SAMN05444358_103300 | Not Available | Positive | 2434348 - 2434647 | 10510.7 |
| trna synthetases class i (w and y) | SAMN05444358_103301 | Not Available | Negative | 2435168 - 2435404 | 8640.35 |
| dna-binding transcriptional regulator gbsr, marr family | SAMN05444358_103302 | Not Available | Positive | 2435787 - 2436350 | 21007.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
