Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN05444358_103283 | Not Available | Negative | 2419366 - 2419968 | 21959.4 |
| phage shock protein a (pspa) family protein | SAMN05444358_103284 | Not Available | Positive | 2420080 - 2420781 | 26202.0 |
| hypothetical protein | SAMN05444358_103285 | Not Available | Positive | 2420829 - 2421119 | 10717.0 |
| hypothetical protein | SAMN05444358_103286 | Not Available | Negative | 2421116 - 2422090 | 35284.0 |
| hypothetical protein | SAMN05444358_103287 | Not Available | Negative | 2422090 - 2423196 | 41589.7 |
| hypothetical protein | SAMN05444358_103288 | Not Available | Negative | 2423193 - 2424377 | 42807.2 |
| thif family protein | SAMN05444358_103289 | Not Available | Negative | 2424374 - 2425249 | 31842.3 |
| hypothetical protein | SAMN05444358_103290 | Not Available | Negative | 2425249 - 2426169 | 34283.4 |
| dde domain-containing protein | SAMN05444358_103291 | Not Available | Negative | 2426294 - 2426641 | 13008.0 |
| homoserine dehydrogenase | SAMN05444358_103292 | Not Available | Positive | 2426646 - 2427287 | 22585.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
