Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-methylmalyl-coa/l-malyl-coa lyase | SAMN05444358_103263 | Not Available | Positive | 2398577 - 2399539 | 34253.6 |
| pa14 domain-containing protein | SAMN05444358_103264 | Not Available | Negative | 2399587 - 2400165 | 20786.7 |
| transcriptional regulator, asnc family | SAMN05444358_103265 | Not Available | Negative | 2400284 - 2400736 | 16296.6 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05444358_103266 | Not Available | Positive | 2400809 - 2401405 | 21542.0 |
| transcriptional regulator, arac family | SAMN05444358_103267 | Not Available | Negative | 2401407 - 2402240 | 30684.3 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | SAMN05444358_103268 | Not Available | Positive | 2402363 - 2403325 | 34760.6 |
| lytic murein transglycosylase | SAMN05444358_103269 | Not Available | Negative | 2403330 - 2404460 | 40013.1 |
| transcriptional regulator, gntr family | SAMN05444358_103270 | Not Available | Negative | 2404573 - 2405133 | 20519.3 |
| hypothetical protein | SAMN05444358_103271 | Not Available | Negative | 2405251 - 2405943 | 25806.9 |
| tigr02300 family protein | SAMN05444358_103272 | Not Available | Positive | 2406044 - 2406367 | 11972.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
