Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l35p | SAMN05444358_103253 | Not Available | Negative | 2389665 - 2389865 | 7354.23 |
| alanine or glycine:cation symporter, agcs family | SAMN05444358_103254 | Not Available | Negative | 2390049 - 2391599 | 54563.9 |
| nucleotide-binding universal stress protein, uspa family | SAMN05444358_103255 | Not Available | Negative | 2391614 - 2392051 | 15637.7 |
| pyruvate kinase | SAMN05444358_103256 | Not Available | Negative | 2392294 - 2393739 | 51504.0 |
| predicted n-formylglutamate amidohydrolase | SAMN05444358_103257 | Not Available | Positive | 2393857 - 2394594 | 27277.3 |
| hypothetical protein | SAMN05444358_103258 | Not Available | Positive | 2394671 - 2394910 | 9352.91 |
| hypothetical protein | SAMN05444358_103259 | Not Available | Positive | 2395012 - 2395326 | 12097.2 |
| d-alanine transaminase | SAMN05444358_103260 | Not Available | Negative | 2395371 - 2396231 | 31628.8 |
| l-alanine-dl-glutamate epimerase | SAMN05444358_103261 | Not Available | Negative | 2396243 - 2397208 | 34464.3 |
| uncharacterized conserved protein, nad-dependent epimerase/dehydratase family | SAMN05444358_103262 | Not Available | Negative | 2397280 - 2398281 | 35416.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
