Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system permease protein | SAMN05444358_103243 | Not Available | Negative | 2379290 - 2380051 | 27966.0 |
| abc-2 type transport system atp-binding protein | SAMN05444358_103244 | Not Available | Negative | 2380048 - 2380977 | 33839.0 |
| hypothetical protein | SAMN05444358_103245 | Not Available | Negative | 2381069 - 2381584 | 18004.3 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444358_103246 | Not Available | Positive | 2381730 - 2382824 | 39265.8 |
| uroporphyrinogen decarboxylase | SAMN05444358_103247 | Not Available | Negative | 2382882 - 2383916 | 37314.3 |
| hydroxymethylbilane synthase | SAMN05444358_103248 | Not Available | Positive | 2384024 - 2384980 | 34195.0 |
| adenylate/guanylate cyclase | SAMN05444358_103249 | Not Available | Negative | 2385207 - 2387441 | 79857.3 |
| fecr family protein | SAMN05444358_103250 | Not Available | Negative | 2387487 - 2388446 | 33268.5 |
| Trna-ser | Not Available | Not Available | Positive | 2388747 - 2388836 | Not Available |
| lsu ribosomal protein l20p | SAMN05444358_103252 | Not Available | Negative | 2389285 - 2389650 | 13533.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
