Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanyl-trna synthetase beta subunit | SAMN05444358_103223 | Not Available | Negative | 2359741 - 2362137 | 86389.3 |
| polyhydroxybutyrate depolymerase | SAMN05444358_103224 | Not Available | Negative | 2362216 - 2363019 | 29591.2 |
| hypothetical protein | SAMN05444358_103225 | Not Available | Negative | 2363318 - 2363914 | 22580.9 |
| phenylalanyl-trna synthetase, alpha subunit | SAMN05444358_103226 | Not Available | Negative | 2363911 - 2364984 | 39814.4 |
| glutamate--cysteine ligase | SAMN05444358_103227 | Not Available | Negative | 2365055 - 2366425 | 50775.3 |
| hypothetical protein | SAMN05444358_103228 | Not Available | Negative | 2366491 - 2367018 | 18922.2 |
| acetyltransferase (gnat) family protein | SAMN05444358_103229 | Not Available | Negative | 2367015 - 2367863 | 30889.7 |
| 16s rrna (uracil1498-n3)-methyltransferase | SAMN05444358_103230 | Not Available | Negative | 2367860 - 2368585 | 26561.2 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN05444358_103231 | Not Available | Positive | 2368598 - 2369560 | 35454.3 |
| ompa-ompf porin, oop family | SAMN05444358_103232 | Not Available | Positive | 2369585 - 2371531 | 69500.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
