Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate lyase | SAMN05444358_103153 | Not Available | Negative | 2300365 - 2301753 | 50158.6 |
| peroxiredoxin | SAMN05444358_103154 | Not Available | Positive | 2301775 - 2302341 | 20517.7 |
| hypothetical protein | SAMN05444358_103155 | Not Available | Positive | 2302407 - 2302772 | 12852.6 |
| hypothetical protein | SAMN05444358_103156 | Not Available | Positive | 2302891 - 2303277 | 14452.4 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN05444358_103157 | Not Available | Positive | 2303274 - 2304245 | 36860.4 |
| hypothetical protein | SAMN05444358_103158 | Not Available | Positive | 2304336 - 2304524 | 6248.97 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN05444358_103159 | Not Available | Positive | 2304636 - 2305469 | 30976.0 |
| acetyl-coa acetyltransferase | SAMN05444358_103160 | Not Available | Positive | 2305665 - 2306840 | 40624.5 |
| 3-oxoacyl-[acyl-carrier-protein] reductase /acetoacetyl-coa reductase | SAMN05444358_103161 | Not Available | Positive | 2307026 - 2307748 | 25358.1 |
| hypothetical protein | SAMN05444358_103162 | Not Available | Negative | 2307830 - 2307940 | 4246.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
