Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-coa synthetase (adp-forming) beta subunit | SAMN05444358_103133 | Not Available | Positive | 2280550 - 2281743 | 42486.2 |
| hypothetical protein | SAMN05444358_103134 | Not Available | Positive | 2281743 - 2282288 | 18788.5 |
| succinyl-coa synthetase (adp-forming) alpha subunit | SAMN05444358_103135 | Not Available | Positive | 2282335 - 2283216 | 30283.5 |
| hypothetical protein | SAMN05444358_103136 | Not Available | Positive | 2283220 - 2283906 | 25047.6 |
| uncharacterized membrane protein yhah, duf805 family | SAMN05444358_103137 | Not Available | Positive | 2283903 - 2284445 | 20003.6 |
| 2-oxoglutarate dehydrogenase e1 component | SAMN05444358_103138 | Not Available | Positive | 2284442 - 2287399 | 109896.0 |
| 2-oxoglutarate dehydrogenase e2 component | SAMN05444358_103139 | Not Available | Positive | 2287403 - 2288917 | 51902.5 |
| hypothetical protein | SAMN05444358_103140 | Not Available | Positive | 2288920 - 2289189 | 10264.3 |
| dihydrolipoamide dehydrogenase | SAMN05444358_103141 | Not Available | Positive | 2289261 - 2290649 | 49062.4 |
| uncharacterized conserved protein, tellurite resistance protein b (terb) family | SAMN05444358_103142 | Not Available | Positive | 2290814 - 2291668 | 30713.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
