Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase subunit c | SAMN05444358_103123 | Not Available | Negative | 2273873 - 2274256 | 14209.7 |
| ca-activated chloride channel family protein | SAMN05444358_103124 | Not Available | Negative | 2274461 - 2275135 | 24532.3 |
| l-erythro-3-methylmalyl-coa dehydratase | SAMN05444358_103125 | Not Available | Negative | 2275202 - 2276230 | 37927.0 |
| hypothetical protein | SAMN05444358_103126 | Not Available | Negative | 2276230 - 2276436 | 7702.1 |
| nnru protein | SAMN05444358_103127 | Not Available | Negative | 2276449 - 2277003 | 19943.3 |
| (3s)-malyl-coa thioesterase | SAMN05444358_103128 | Not Available | Negative | 2277010 - 2277867 | 30466.5 |
| hypothetical protein | SAMN05444358_103129 | Not Available | Negative | 2277812 - 2277952 | 5079.35 |
| hypothetical protein | SAMN05444358_103130 | Not Available | Positive | 2278046 - 2278351 | 10797.2 |
| hypothetical protein | SAMN05444358_103131 | Not Available | Negative | 2278355 - 2279110 | 27245.0 |
| malate dehydrogenase (nad) | SAMN05444358_103132 | Not Available | Positive | 2279269 - 2280231 | 33293.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
