Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside abc transporter atp-binding protein | SAMN05444358_103103 | Not Available | Positive | 2253654 - 2255183 | 55266.9 |
| nucleoside abc transporter membrane protein | SAMN05444358_103104 | Not Available | Positive | 2255187 - 2256281 | 38980.7 |
| nucleoside abc transporter membrane protein | SAMN05444358_103105 | Not Available | Positive | 2256281 - 2257291 | 35734.3 |
| hypothetical protein | SAMN05444358_103106 | Not Available | Positive | 2257552 - 2258472 | 32250.3 |
| conserved hypothetical protein | SAMN05444358_103107 | Not Available | Positive | 2258474 - 2259238 | 28194.1 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05444358_103108 | Not Available | Negative | 2259242 - 2259970 | 25518.6 |
| exodeoxyribonuclease-5 | SAMN05444358_103109 | Not Available | Negative | 2259967 - 2261499 | 56392.6 |
| acyl homoserine lactone synthase | SAMN05444358_103110 | Not Available | Negative | 2261560 - 2262198 | 23763.5 |
| regulatory protein, luxr family | SAMN05444358_103111 | Not Available | Negative | 2262282 - 2263001 | 26887.7 |
| hypothetical protein | SAMN05444358_103112 | Not Available | Negative | 2262940 - 2263158 | 7680.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
