Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine/d-amino acid oxidase | SAMN05444358_10363 | Not Available | Negative | 2211627 - 2212958 | 48126.6 |
| hypothetical protein | SAMN05444358_10364 | Not Available | Negative | 2213108 - 2213449 | 12240.7 |
| nad+ synthase | SAMN05444358_10365 | Not Available | Negative | 2213659 - 2215317 | 60696.8 |
| uncharacterized conserved protein | SAMN05444358_10366 | Not Available | Positive | 2215471 - 2216955 | 53229.2 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444358_10367 | Not Available | Negative | 2216963 - 2217616 | 22836.6 |
| 2-isopropylmalate synthase | SAMN05444358_10368 | Not Available | Positive | 2217904 - 2219472 | 57059.7 |
| 23s rrna (adenine2030-n6)-methyltransferase | SAMN05444358_10369 | Not Available | Negative | 2219645 - 2220430 | 29066.9 |
| rod shape-determining protein mreb | SAMN05444358_10370 | Not Available | Positive | 2220586 - 2221632 | 36904.9 |
| rod shape-determining protein mrec | SAMN05444358_10371 | Not Available | Positive | 2221689 - 2222591 | 33050.8 |
| rod shape-determining protein mred | SAMN05444358_10372 | Not Available | Positive | 2222584 - 2223120 | 19552.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
