Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pectate lyase superfamily protein | SAMN05444358_10333 | Not Available | Negative | 2181608 - 2183893 | 81811.9 |
| protein of unknown function | SAMN05444358_10334 | Not Available | Negative | 2184027 - 2184428 | 14543.4 |
| lysyl-trna synthetase, class i | SAMN05444358_10335 | Not Available | Negative | 2184477 - 2186051 | 59426.4 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05444358_10336 | Not Available | Negative | 2186386 - 2186679 | 10200.0 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05444358_10337 | Not Available | Negative | 2186683 - 2186910 | 7978.43 |
| phosphoglycerate dehydrogenase | SAMN05444358_10338 | Not Available | Negative | 2186921 - 2187889 | 35177.2 |
| mmge/prpd family protein | SAMN05444358_10339 | Not Available | Negative | 2187882 - 2188640 | 27037.0 |
| maleate isomerase/arylmalonate decarboxylase | SAMN05444358_10340 | Not Available | Negative | 2188637 - 2189380 | 26388.6 |
| histidinol-phosphate aminotransferase/n-methylhydantoinase b | SAMN05444358_10341 | Not Available | Negative | 2189377 - 2190459 | 38578.3 |
| n-methylhydantoinase b | SAMN05444358_10342 | Not Available | Negative | 2190456 - 2192105 | 59064.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
