Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyketide cyclase / dehydrase and lipid transport | SAMN05444358_10323 | Not Available | Positive | 2174080 - 2174550 | 17341.9 |
| excinuclease abc subunit b | SAMN05444358_10324 | Not Available | Positive | 2174628 - 2176814 | 82229.6 |
| hypothetical protein | SAMN05444358_10325 | Not Available | Positive | 2176811 - 2177431 | 24351.6 |
| hypothetical protein | SAMN05444358_10326 | Not Available | Negative | 2177557 - 2177847 | 10446.5 |
| orf6n domain-containing protein | SAMN05444358_10327 | Not Available | Positive | 2178071 - 2178778 | 26079.1 |
| predicted dna-binding protein, mmcq/yjbr family | SAMN05444358_10328 | Not Available | Negative | 2178775 - 2179128 | 12901.6 |
| excalibur calcium-binding domain-containing protein | SAMN05444358_10329 | Not Available | Negative | 2179438 - 2179917 | 17340.2 |
| nucleotide-binding universal stress protein, uspa family | SAMN05444358_10330 | Not Available | Negative | 2179951 - 2180358 | 14844.0 |
| heme-degrading monooxygenase hmoa | SAMN05444358_10331 | Not Available | Negative | 2180424 - 2180750 | 12420.6 |
| hypothetical protein | SAMN05444358_10332 | Not Available | Positive | 2180883 - 2181566 | 25539.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
