Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0271 protein | SAMN05444358_1033 | Not Available | Positive | 2156108 - 2156869 | 27113.8 |
| hypothetical protein | SAMN05444358_1034 | Not Available | Positive | 2156999 - 2158246 | 46956.0 |
| d-alanyl-d-alanine carboxypeptidase | SAMN05444358_1035 | Not Available | Negative | 2158409 - 2159806 | 49898.4 |
| putative hydrolase of the had superfamily | SAMN05444358_1036 | Not Available | Negative | 2160057 - 2160758 | 25881.9 |
| atp-dependent clp protease adaptor protein clps | SAMN05444358_1037 | Not Available | Positive | 2160851 - 2161192 | 13156.0 |
| 16s rrna (guanine1207-n2)-methyltransferase | SAMN05444358_1038 | Not Available | Positive | 2161219 - 2162181 | 34268.0 |
| 7-alpha-hydroxysteroid dehydrogenase | SAMN05444358_1039 | Not Available | Positive | 2162219 - 2163019 | 28430.7 |
| coproporphyrinogen oxidase | SAMN05444358_10310 | Not Available | Positive | 2163025 - 2163909 | 33232.2 |
| hypothetical protein | SAMN05444358_10311 | Not Available | Negative | 2163913 - 2164320 | 14468.4 |
| molybdate transport system atp-binding protein | SAMN05444358_10312 | Not Available | Negative | 2164487 - 2165584 | 39162.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
