Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative spermidine/putrescine transport system atp-binding protein | SAMN05444358_102286 | Not Available | Negative | 2147535 - 2148656 | 41426.0 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN05444358_102287 | Not Available | Negative | 2148653 - 2149030 | 13948.4 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN05444358_102288 | Not Available | Negative | 2149076 - 2149417 | 12463.6 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN05444358_102289 | Not Available | Negative | 2149414 - 2149683 | 9423.18 |
| transcriptional regulator, xre family with cupin sensor | SAMN05444358_102290 | Not Available | Positive | 2149873 - 2150463 | 22212.6 |
| diaminopimelate decarboxylase | SAMN05444358_102291 | Not Available | Negative | 2150472 - 2151743 | 46218.1 |
| gamma-glutamyltranspeptidase / glutathione hydrolase | SAMN05444358_102292 | Not Available | Negative | 2151838 - 2153586 | 62656.8 |
| universal stress protein family protein | SAMN05444358_102293 | Not Available | Negative | 2153688 - 2153894 | 7240.72 |
| sensor histidine kinase inhibitor, kipi family | SAMN05444358_1031 | Not Available | Positive | 2154354 - 2155103 | 27026.4 |
| biotin-dependent carboxylase uncharacterized domain-containing protein | SAMN05444358_1032 | Not Available | Positive | 2155100 - 2156095 | 34925.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
