Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine/d-amino acid oxidase | SAMN05444358_102276 | Not Available | Negative | 2136439 - 2137719 | 46997.2 |
| monoamine oxidase | SAMN05444358_102277 | Not Available | Negative | 2137942 - 2139264 | 47569.2 |
| yhs domain-containing protein | SAMN05444358_102278 | Not Available | Positive | 2139562 - 2140119 | 19923.0 |
| l-alanine dehydrogenase | SAMN05444358_102279 | Not Available | Negative | 2140215 - 2141330 | 38709.7 |
| malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase | SAMN05444358_102280 | Not Available | Negative | 2141606 - 2143108 | 53699.1 |
| transcriptional regulator, lysr family | SAMN05444358_102281 | Not Available | Positive | 2143211 - 2144107 | 33515.3 |
| sarcosine oxidase | SAMN05444358_102282 | Not Available | Negative | 2144110 - 2145381 | 45245.2 |
| hypothetical protein | SAMN05444358_102283 | Not Available | Negative | 2145396 - 2145749 | 12780.2 |
| putative spermidine/putrescine transport system permease protein | SAMN05444358_102284 | Not Available | Negative | 2145831 - 2146649 | 29757.3 |
| putative spermidine/putrescine transport system permease protein/spermidine/putrescine transport system permease protein | SAMN05444358_102285 | Not Available | Negative | 2146649 - 2147533 | 33014.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
