Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putrescine transport system permease protein | SAMN05444358_102266 | Not Available | Positive | 2126646 - 2127542 | 33513.8 |
| putrescine transport system permease protein | SAMN05444358_102267 | Not Available | Positive | 2127539 - 2128357 | 29384.4 |
| glutamate--putrescine ligase | SAMN05444358_102268 | Not Available | Positive | 2128354 - 2129694 | 49113.9 |
| glycine/d-amino acid oxidase | SAMN05444358_102269 | Not Available | Positive | 2129697 - 2131028 | 48544.4 |
| gmp synthase-glutamine amidotransferase | SAMN05444358_102270 | Not Available | Positive | 2131028 - 2131759 | 26903.6 |
| glutathione s-transferase | SAMN05444358_102271 | Not Available | Positive | 2131759 - 2132430 | 24618.5 |
| protein of unknown function | SAMN05444358_102272 | Not Available | Positive | 2132430 - 2133167 | 26719.9 |
| nadh dehydrogenase | SAMN05444358_102273 | Not Available | Negative | 2133161 - 2134474 | 47760.9 |
| hypothetical protein | SAMN05444358_102274 | Not Available | Negative | 2134535 - 2134891 | 12997.0 |
| acyl-coa reductase | SAMN05444358_102275 | Not Available | Negative | 2135035 - 2136417 | 49781.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
