Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase (nad+) | SAMN05444358_102256 | Not Available | Negative | 2115403 - 2116833 | 50940.6 |
| hypothetical protein | SAMN05444358_102257 | Not Available | Negative | 2116881 - 2117240 | 13417.8 |
| glycine/d-amino acid oxidase | SAMN05444358_102258 | Not Available | Negative | 2117261 - 2118595 | 49425.1 |
| transcriptional regulator, tetr family | SAMN05444358_102259 | Not Available | Negative | 2118592 - 2119248 | 24111.8 |
| gamma-glutamylputrescine oxidase | SAMN05444358_102260 | Not Available | Negative | 2119315 - 2120616 | 47502.8 |
| putrescine aminotransferase | SAMN05444358_102261 | Not Available | Negative | 2120631 - 2122025 | 50652.7 |
| glutamine synthetase | SAMN05444358_102262 | Not Available | Negative | 2122040 - 2123416 | 51254.9 |
| transcriptional regulator, gntr family | SAMN05444358_102263 | Not Available | Negative | 2123530 - 2124177 | 23947.9 |
| putrescine transport system substrate-binding protein | SAMN05444358_102264 | Not Available | Positive | 2124333 - 2125421 | 39774.4 |
| putrescine transport system atp-binding protein | SAMN05444358_102265 | Not Available | Positive | 2125495 - 2126634 | 42463.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
