Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+-transporting nadh:ubiquinone oxidoreductase subunit d | SAMN05444358_102236 | Not Available | Negative | 2092253 - 2092906 | 23669.7 |
| na+-transporting nadh:ubiquinone oxidoreductase subunit c | SAMN05444358_102237 | Not Available | Negative | 2092906 - 2093721 | 28835.2 |
| na+-transporting nadh:ubiquinone oxidoreductase subunit b | SAMN05444358_102238 | Not Available | Negative | 2093714 - 2094922 | 43981.4 |
| na+-transporting nadh:ubiquinone oxidoreductase subunit a | SAMN05444358_102239 | Not Available | Negative | 2094928 - 2096289 | 48474.1 |
| putative n6-adenine-specific dna methylase | SAMN05444358_102240 | Not Available | Positive | 2096571 - 2097686 | 40964.3 |
| Trna-pro | Not Available | Not Available | Positive | 2097814 - 2097890 | Not Available |
| mobilisation protein (mobc) | SAMN05444358_102242 | Not Available | Positive | 2098138 - 2098383 | 8766.01 |
| hypothetical protein | SAMN05444358_102243 | Not Available | Positive | 2098386 - 2098826 | 16263.2 |
| putative transposase | SAMN05444358_102244 | Not Available | Negative | 2098781 - 2098939 | 5913.28 |
| hypothetical protein | SAMN05444358_102245 | Not Available | Positive | 2099279 - 2100913 | 60940.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
