Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system substrate-binding protein | SAMN05444358_102186 | Not Available | Negative | 2033748 - 2035313 | 57268.4 |
| peptide/nickel transport system substrate-binding protein | SAMN05444358_102187 | Not Available | Negative | 2035463 - 2037043 | 57654.8 |
| uncharacterized protein | SAMN05444358_102188 | Not Available | Negative | 2037274 - 2039580 | 83309.5 |
| protein of unknown function | SAMN05444358_102189 | Not Available | Positive | 2039750 - 2041216 | 53825.5 |
| two-component system, ompr family, response regulator | SAMN05444358_102190 | Not Available | Positive | 2041194 - 2041871 | 24764.2 |
| signal transduction histidine kinase | SAMN05444358_102191 | Not Available | Positive | 2041859 - 2042824 | 33792.2 |
| tetratricopeptide repeat-containing protein | SAMN05444358_102192 | Not Available | Positive | 2042900 - 2044030 | 42932.7 |
| isocitrate dehydrogenase | SAMN05444358_102193 | Not Available | Positive | 2044222 - 2046435 | 78639.7 |
| hypothetical protein | SAMN05444358_102194 | Not Available | Negative | 2046425 - 2046694 | 10187.9 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444358_102195 | Not Available | Negative | 2046794 - 2047900 | 39611.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
