Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucuronate 4-epimerase | SAMN05444358_102176 | Not Available | Negative | 2023723 - 2024736 | 38114.2 |
| phosphonoacetaldehyde dehydrogenase | SAMN05444358_102177 | Not Available | Negative | 2024866 - 2026314 | 53023.7 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05444358_102178 | Not Available | Negative | 2026380 - 2026715 | 11856.3 |
| amino acid abc transporter membrane protein, paat family | SAMN05444358_102179 | Not Available | Negative | 2026727 - 2027488 | 28352.5 |
| amino acid abc transporter atp-binding protein, paat family | SAMN05444358_102180 | Not Available | Negative | 2027499 - 2028239 | 27381.2 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444358_102181 | Not Available | Positive | 2028361 - 2029131 | 28251.7 |
| creatinine amidohydrolase | SAMN05444358_102182 | Not Available | Positive | 2029177 - 2029914 | 26191.8 |
| peptide/nickel transport system atp-binding protein | SAMN05444358_102183 | Not Available | Negative | 2030014 - 2031726 | 62868.7 |
| peptide/nickel transport system permease protein | SAMN05444358_102184 | Not Available | Negative | 2031731 - 2032681 | 34372.8 |
| peptide/nickel transport system permease protein | SAMN05444358_102185 | Not Available | Negative | 2032678 - 2033655 | 35896.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
