Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sapc protein | SAMN05444358_102166 | Not Available | Negative | 2006412 - 2007218 | 30146.8 |
| ig-like domain (group 3) | SAMN05444358_102167 | Not Available | Negative | 2007283 - 2011134 | 126989.0 |
| hypothetical protein | SAMN05444358_102168 | Not Available | Positive | 2011358 - 2013403 | 69633.5 |
| hlyd family secretion protein | SAMN05444358_102169 | Not Available | Negative | 2013424 - 2014731 | 48433.7 |
| atp-binding cassette, subfamily c | SAMN05444358_102170 | Not Available | Negative | 2014731 - 2016470 | 62475.2 |
| fad dependent oxidoreductase | SAMN05444358_102171 | Not Available | Negative | 2016713 - 2018047 | 47663.5 |
| udp-n-acetyl-d-glucosamine dehydrogenase | SAMN05444358_102172 | Not Available | Negative | 2018169 - 2019500 | 49048.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444358_102173 | Not Available | Negative | 2019681 - 2021120 | 54222.2 |
| udp-n-acetyl-2-amino-2-deoxyglucuronate dehydrogenase | SAMN05444358_102174 | Not Available | Positive | 2021361 - 2022314 | 35753.1 |
| udp-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase | SAMN05444358_102175 | Not Available | Positive | 2022557 - 2023639 | 38951.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
