Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| capsular exopolysaccharide family | SAMN05444358_102156 | Not Available | Positive | 1993592 - 1994440 | 31765.7 |
| hypothetical protein | SAMN05444358_102157 | Not Available | Negative | 1994434 - 1995996 | 57442.7 |
| polymer biosynthesis protein, wecb/taga/cpsf family | SAMN05444358_102158 | Not Available | Negative | 1996034 - 1996822 | 29061.4 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN05444358_102159 | Not Available | Positive | 1997306 - 1998769 | 52667.3 |
| gtra-like protein | SAMN05444358_102160 | Not Available | Positive | 1998766 - 1999191 | 15828.6 |
| fad/fmn-containing dehydrogenase | SAMN05444358_102161 | Not Available | Positive | 1999188 - 2000513 | 48688.4 |
| hypothetical protein | SAMN05444358_102162 | Not Available | Positive | 2000510 - 2001247 | 26897.4 |
| membrane fusion protein, adhesin transport system | SAMN05444358_102163 | Not Available | Negative | 2001662 - 2002972 | 48357.4 |
| atp-binding cassette, subfamily c, lapb | SAMN05444358_102164 | Not Available | Negative | 2002956 - 2005088 | 76659.7 |
| outer membrane protein tolc | SAMN05444358_102165 | Not Available | Negative | 2005085 - 2006425 | 47520.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
