Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| natural product biosynthesis luciferase-like monooxygenase domain-containing protein | SAMN05444358_102146 | Not Available | Negative | 1972048 - 1976667 | 166371.0 |
| hypothetical protein | SAMN05444358_102147 | Not Available | Negative | 1976670 - 1977686 | 37750.1 |
| acyl transferase domain-containing protein | SAMN05444358_102148 | Not Available | Negative | 1977683 - 1984126 | 234532.0 |
| hypothetical protein | SAMN05444358_102149 | Not Available | Negative | 1984421 - 1985833 | 51645.8 |
| polysaccharide export outer membrane protein | SAMN05444358_102150 | Not Available | Negative | 1985854 - 1986453 | 21485.1 |
| hypothetical protein | SAMN05444358_102151 | Not Available | Positive | 1986724 - 1986927 | 6765.6 |
| flp pilus assembly protein tadd, contains tpr repeats | SAMN05444358_102152 | Not Available | Negative | 1986955 - 1989384 | 89755.6 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN05444358_102153 | Not Available | Negative | 1989451 - 1990143 | 25387.5 |
| type ii secretion system protein a | SAMN05444358_102154 | Not Available | Positive | 1991023 - 1992024 | 36897.1 |
| uncharacterized protein involved in exopolysaccharide biosynthesis | SAMN05444358_102155 | Not Available | Positive | 1992021 - 1993577 | 57568.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
