Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444358_102136 | Not Available | Negative | 1962818 - 1963687 | 32016.3 |
| hypothetical protein | SAMN05444358_102137 | Not Available | Positive | 1964008 - 1964976 | 36762.2 |
| hypothetical protein | SAMN05444358_102138 | Not Available | Negative | 1965290 - 1965463 | 6727.23 |
| hypothetical protein | SAMN05444358_102139 | Not Available | Negative | 1965463 - 1966323 | 33088.9 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN05444358_102140 | Not Available | Positive | 1966968 - 1967534 | 20982.9 |
| dtdp-glucose 4,6-dehydratase | SAMN05444358_102141 | Not Available | Positive | 1967534 - 1968574 | 38104.0 |
| dtdp-4-dehydrorhamnose reductase | SAMN05444358_102142 | Not Available | Positive | 1968571 - 1969440 | 31046.6 |
| glucose-1-phosphate thymidylyltransferase | SAMN05444358_102143 | Not Available | Positive | 1969452 - 1970318 | 31617.9 |
| hypothetical protein | SAMN05444358_102144 | Not Available | Negative | 1970416 - 1971354 | 35151.6 |
| 4'-phosphopantetheinyl transferase superfamily protein | SAMN05444358_102145 | Not Available | Negative | 1971341 - 1972051 | 26060.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
