Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative tricarboxylic transport membrane protein | SAMN05444358_102116 | Not Available | Negative | 1941665 - 1943197 | 54487.6 |
| tripartite tricarboxylate transporter tctb family protein | SAMN05444358_102117 | Not Available | Negative | 1943208 - 1943744 | 20312.3 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444358_102118 | Not Available | Negative | 1943805 - 1944734 | 32695.8 |
| transcriptional regulator, iclr family | SAMN05444358_102119 | Not Available | Positive | 1944843 - 1945622 | 28072.8 |
| hypothetical protein | SAMN05444358_102120 | Not Available | Positive | 1945656 - 1947008 | 48578.9 |
| homoprotocatechuate degradation operon regulator, hpar | SAMN05444358_102121 | Not Available | Negative | 1947041 - 1947481 | 16686.4 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | SAMN05444358_102122 | Not Available | Positive | 1947587 - 1947976 | 14370.2 |
| 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | SAMN05444358_102123 | Not Available | Positive | 1947973 - 1949484 | 55070.6 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | SAMN05444358_102124 | Not Available | Positive | 1949535 - 1950386 | 31291.1 |
| catechol 2,3-dioxygenase | SAMN05444358_102125 | Not Available | Positive | 1950399 - 1951382 | 37332.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
