Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| surfeit locus 1 family protein | SAMN05444358_102106 | Not Available | Positive | 1932377 - 1933087 | 26062.5 |
| outer membrane transport energization protein tonb | SAMN05444358_102107 | Not Available | Negative | 1933167 - 1934009 | 30383.0 |
| outer membrane transport energization protein exbd | SAMN05444358_102108 | Not Available | Negative | 1934006 - 1934389 | 13633.5 |
| biopolymer transport protein exbd | SAMN05444358_102109 | Not Available | Negative | 1934394 - 1934765 | 13359.4 |
| outer membrane transport energization protein exbb | SAMN05444358_102110 | Not Available | Negative | 1934770 - 1935681 | 31932.0 |
| siderophore-interacting protein | SAMN05444358_102111 | Not Available | Negative | 1935678 - 1936166 | 17883.0 |
| uncharacterized protein, upf0261 family | SAMN05444358_102112 | Not Available | Negative | 1936679 - 1937911 | 43990.7 |
| ser/thr protein kinase rdoa involved in cpx stress response, mazf antagonist | SAMN05444358_102113 | Not Available | Negative | 1937908 - 1938867 | 36621.8 |
| 4-aminobutyrate aminotransferase | SAMN05444358_102114 | Not Available | Negative | 1938864 - 1940159 | 47470.6 |
| gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase | SAMN05444358_102115 | Not Available | Negative | 1940175 - 1941659 | 52440.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
