Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-d-ribose 1-methylphosphonate 5-phosphate c-p lyase | SAMN05444358_10286 | Not Available | Positive | 1909113 - 1909964 | 31765.6 |
| putative phosphonate transport system atp-binding protein | SAMN05444358_10287 | Not Available | Positive | 1909961 - 1910731 | 27871.7 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phnl | SAMN05444358_10288 | Not Available | Positive | 1910735 - 1911418 | 24630.7 |
| ribose 1,5-bisphosphokinase | SAMN05444358_10289 | Not Available | Positive | 1911415 - 1911966 | 19686.8 |
| putative phosphonate metabolism protein | SAMN05444358_10290 | Not Available | Negative | 1911942 - 1912613 | 25035.2 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | SAMN05444358_10291 | Not Available | Positive | 1912699 - 1913805 | 39934.6 |
| dna-binding transcriptional regulator, gntr family | SAMN05444358_10292 | Not Available | Negative | 1913802 - 1914527 | 26991.6 |
| altronate hydrolase/galactarate dehydratase | SAMN05444358_10293 | Not Available | Positive | 1914612 - 1916165 | 54894.4 |
| nadph-dependent ferric siderophore reductase, contains fad-binding and sip domains | SAMN05444358_10294 | Not Available | Negative | 1916295 - 1917341 | 38229.3 |
| iron complex transport system atp-binding protein | SAMN05444358_10295 | Not Available | Negative | 1917354 - 1918136 | 28139.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
