Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative hemin transport protein | SAMN05444358_10276 | Not Available | Positive | 1899769 - 1900815 | 38669.3 |
| iron complex transport system substrate-binding protein | SAMN05444358_10277 | Not Available | Positive | 1900812 - 1901654 | 29246.3 |
| iron complex transport system permease protein | SAMN05444358_10278 | Not Available | Positive | 1901647 - 1902711 | 36347.4 |
| iron complex transport system atp-binding protein | SAMN05444358_10279 | Not Available | Positive | 1902716 - 1903492 | 27639.7 |
| protein of unknown function | SAMN05444358_10280 | Not Available | Positive | 1903639 - 1905039 | 49897.1 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN05444358_10281 | Not Available | Positive | 1905102 - 1906130 | 39369.8 |
| transcriptional regulator, gntr family | SAMN05444358_10282 | Not Available | Negative | 1906209 - 1906928 | 25678.5 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phng | SAMN05444358_10283 | Not Available | Positive | 1907010 - 1907465 | 16029.3 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phnh | SAMN05444358_10284 | Not Available | Positive | 1907465 - 1908028 | 19465.3 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phni | SAMN05444358_10285 | Not Available | Positive | 1908028 - 1909116 | 39977.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
