Ruegeria halocynthiae

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Ruegeria

Description

Ruegeria halocynthiae is a Gram-negative, non-motile bacterial species characterized by its rod-shaped morphology. This organism thrives in mesophilic conditions with an optimal growth temperature of 29°C, indicating its preference for moderate temperature environments. R. halocynthiae has a singular replicon, which is a notable trait for its genetic organization. The genome of this bacterium can be accessed through the accession number FNNP00000000.1, providing a resource for further genomic and functional studies. From a biological and ecological perspective, the adaptations of Ruegeria halocynthiae to its mesophilic environment may suggest its role in marine ecosystems, particularly in interactions with marine organisms. Its Gram-negative nature may also play a role in its ecological interactions, such as nutrient cycling or symbiotic relationships, although specific interactions are not detailed in the provided traits. Understanding the growth conditions and genetic framework of R. halocynthiae could provide insights into its ecological niches and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRuegeria
SpeciesRuegeria halocynthiae
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative / gram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Crambe crambe
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruegeria halocynthiae strain DSM 27839 genome assembly, contig:

Gene Summary

Adenine Count

921858 bp

Thymine Count

924279 bp

Guanine Count

1199491 bp

Cytosine Count

1198040 bp

Genome Length

4243668 bp

Protein-coding Genes

4188 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative hemin transport proteinSAMN05444358_10276Not AvailablePositive1899769 - 190081538669.3
iron complex transport system substrate-binding proteinSAMN05444358_10277Not AvailablePositive1900812 - 190165429246.3
iron complex transport system permease proteinSAMN05444358_10278Not AvailablePositive1901647 - 190271136347.4
iron complex transport system atp-binding proteinSAMN05444358_10279Not AvailablePositive1902716 - 190349227639.7
protein of unknown functionSAMN05444358_10280Not AvailablePositive1903639 - 190503949897.1
sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamilySAMN05444358_10281Not AvailablePositive1905102 - 190613039369.8
transcriptional regulator, gntr familySAMN05444358_10282Not AvailableNegative1906209 - 190692825678.5
alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phngSAMN05444358_10283Not AvailablePositive1907010 - 190746516029.3
alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phnhSAMN05444358_10284Not AvailablePositive1907465 - 190802819465.3
alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phniSAMN05444358_10285Not AvailablePositive1908028 - 190911639977.2

Displaying genes 1931 – 1940 of 4253 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.