Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444358_10266 | Not Available | Positive | 1889762 - 1890595 | 30421.9 |
| amino acid abc transporter membrane protein 2, paat family | SAMN05444358_10267 | Not Available | Positive | 1890650 - 1891531 | 33659.8 |
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit/naphthalene 1,2-dioxygenase system ferredoxin subunit | SAMN05444358_10268 | Not Available | Negative | 1891539 - 1891856 | 11632.0 |
| fatty acid desaturase | SAMN05444358_10269 | Not Available | Negative | 1891860 - 1892804 | 36725.0 |
| hypothetical protein | SAMN05444358_10270 | Not Available | Negative | 1892961 - 1894046 | 39669.9 |
| transcriptional regulator, lysr family | SAMN05444358_10271 | Not Available | Positive | 1894142 - 1895071 | 34349.1 |
| vanillate o-demethylase monooxygenase subunit | SAMN05444358_10272 | Not Available | Positive | 1895167 - 1896216 | 39385.6 |
| hypothetical protein | SAMN05444358_10273 | Not Available | Positive | 1896559 - 1896780 | 7867.56 |
| hypothetical protein | SAMN05444358_10274 | Not Available | Positive | 1896777 - 1897283 | 18929.5 |
| hemoglobin/transferrin/lactoferrin receptor protein | SAMN05444358_10275 | Not Available | Negative | 1897391 - 1899451 | 74515.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
